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Search Results (357)

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20 pages, 1621 KiB  
Article
Risk Perception: Chemical Stimuli in Predator Detection and Feeding Behaviour of the Invasive Round Goby Neogobius melanostomus
by Natalia Z. Szydłowska, Pavel Franta, Marek Let, Vendula Mikšovská, Miloš Buřič and Bořek Drozd
Biology 2024, 13(6), 406; https://doi.org/10.3390/biology13060406 (registering DOI) - 2 Jun 2024
Abstract
The round goby Neogobius melanostomus is a notoriously invasive fish originating from the Ponto-Caspian region that in recent decades has successfully spread across the globe. One of its primary impacts is direct predation; in addition, when entering new ecosystems, the round goby is [...] Read more.
The round goby Neogobius melanostomus is a notoriously invasive fish originating from the Ponto-Caspian region that in recent decades has successfully spread across the globe. One of its primary impacts is direct predation; in addition, when entering new ecosystems, the round goby is likely to become a food resource for many higher native predators. However, little is known either about the indirect effects of predators on the round goby as prey or its feeding behaviour and activity. The non-consumptive effect of the presence of higher native predators presumably plays an important role in mitigating the impact of non-native round gobies as mesopredators on benthic invertebrate communities, especially when both higher- and mesopredators occupy the same habitat. We tested the food consumption probability and gut evacuation rates in round gobies in response to chemical signals from a higher predator, the European eel Anguilla anguilla. Gobies were placed individually in experimental arenas equipped with shelters and exposed to water from a tank in which (a) the higher predator had actively preyed on a heterospecific prey, earthworms Lumbricus sp. (the heterospecific treatment; HS); (b) the higher predator had fed on round gobies (the conspecific treatment; CS); or (c) the water was provided as a control treatment (C). To ensure exposure to the chemical stimuli, this study incorporated the application of skin extracts containing damaged-released alarm cues from the CS treatment; distilled water was used for the remaining treatments. No significant differences were observed in either the food consumption probability or gut evacuation rate in the tested treatments. Despite the lack of reaction to the chemical stimuli, round gobies did exhibit high evacuation rates (R = 0.2323 ± 0.011 h−1; mean ± SE) in which complete gut clearance occurred within 16 h regardless of the applied treatment. This rapid food processing suggests high efficiency and great pressure on resources regardless of the presence or not of a higher predator. These findings hint at the boldness of round gobies, which did not exhibit any pronounced threat sensitivity. This would seem to suggest great efficiency in food processing and a potential competitive advantage over local native species when colonising new ecosystems, irrespective of the presence of native predators. Our study did not detect any non-consumptive effect attributable to the higher predator, given that the feeding activity of the invasive round goby was not altered. Full article
(This article belongs to the Special Issue Risk Assessment for Biological Invasions)
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Figure 1
<p>Experimental arena. Black arrows mark water inflow and outflow, respectively.</p>
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<p>Experimental setup. C, control treatment (supplied by clear water without any chemical cues derived from predator or prey), HS, heterospecific treatment (supplied by water from a tank with predator fed by common earthworms), CS, conspecific treatment (supplied by water from a tank with predator fed by round gobies); solid red lines depict the application of food A (<span class="html-italic">Chironomus</span> sp. larvae) and food B (<span class="html-italic">Gammarus fossarum</span>); the dashed line represents the removal of the remains of food A; blue arrows represent the hours at which the chemical alarm cues (skin extract from the round goby in CS treatment) or distilled water (in C and HS treatments), depending on the treatment, were applied; green arrows denote the time intervals after feeding with food B at which the tested fish were sampled.</p>
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<p>Relative gut content <span class="html-italic">GI</span> (computed as DW food A/DW fish) at the time after food application in the round goby (<span class="html-italic">Neogobius melanostomus</span>) under three experimental treatments: C, control treatment (no chemical cues); CS, conspecific treatment (conspecific alarm cues and kairomones released by a higher predator fed on round gobies); HS, heterospecific treatment (chemical cues released by a higher predator fed on earthworms).</p>
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<p>Overlap between the 95% confidence intervals of the gastric evacuation rates (R; mean ± S.D., n = 144) of the tested round gobies under three experimental treatments: C, control treatment (no chemical cues); CS, conspecific treatment (conspecific alarm cues and kairomones released by a higher predator fed on round goby individuals); HS, heterospecific treatment (chemical cues released by a higher predator fed on earthworms).</p>
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20 pages, 4382 KiB  
Article
Enhancing Selenium Accumulation in Rhodotorula mucilaginosa Strain 6S Using a Proteomic Approach for Aquafeed Development
by Paola Díaz-Navarrete, Alberto Sáez-Arteaga, Luis Marileo, David Alors, David Correa-Galeote and Patricio Dantagnan
Biomolecules 2024, 14(6), 629; https://doi.org/10.3390/biom14060629 - 27 May 2024
Viewed by 757
Abstract
It is known that selenium (Se) is an essential trace element, important for the growth and other biological functions of fish. One of its most important functions is to contribute to the preservation of certain biological components, such as DNA, proteins, and lipids, [...] Read more.
It is known that selenium (Se) is an essential trace element, important for the growth and other biological functions of fish. One of its most important functions is to contribute to the preservation of certain biological components, such as DNA, proteins, and lipids, providing protection against free radicals resulting from normal metabolism. The objective of this study was to evaluate and optimize selenium accumulation in the native yeast Rhodotorula mucilaginosa 6S. Sodium selenite was evaluated at different concentrations (5–10–15–20–30–40 mg/L). Similarly, the effects of different concentrations of nitrogen sources and pH on cell growth and selenium accumulation in the yeast were analyzed. Subsequently, the best cultivation conditions were scaled up to a 2 L reactor with constant aeration, and the proteome of the yeast cultured with and without sodium selenite was evaluated. The optimal conditions for biomass generation and selenium accumulation were found with ammonium chloride and pH 5.5. Incorporating sodium selenite (30 mg/L) during the exponential phase in the bioreactor after 72 h of cultivation resulted in 10 g/L of biomass, with 0.25 mg total Se/g biomass, composed of 25% proteins, 15% lipids, and 0.850 mg total carotenoids/g biomass. The analysis of the proteomes associated with yeast cultivation with and without selenium revealed a total of 1871 proteins. The results obtained showed that the dynamic changes in the proteome, in response to selenium in the experimental medium, are directly related to catalytic activity and oxidoreductase activity in the yeast. R. mucilaginosa 6S could be an alternative for the generation of selenium-rich biomass with a composition of other nutritional compounds also of interest in aquaculture, such as proteins, lipids, and pigments. Full article
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<p>Maximum likelihood phylogenetic tree of <span class="html-italic">Rhodotorula</span> type species for the ITS region (ITS1-5.8S-ITS2). The <span class="html-italic">Sporobolomyces roseus</span> and <span class="html-italic">Sporobolomyces salmonicolor</span> sequences were used as outgroup. Bolded branches possess bootstrap values equal or higher than 70 and are considered to be statistically supported. Values on branches represents bootstrap support (left) and posterior probability (right).</p>
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<p>The growth kinetics of the yeast <span class="html-italic">R. mucilaginosa</span> 6S cultivated with different concentrations of NaSe.</p>
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<p>Effect of sodium selenite (NaSe) on (<b>A</b>) = biomass yield (g/L) and (<b>B</b>) = bioaccumulation of total selenium in biomass (mg/g biomass) in <span class="html-italic">R. mucilaginosa</span> 6S culture. Different letters represent significant differences between NaSe treatments with <span class="html-italic">p</span>-value &lt; 0.05. Error bars represent SD.</p>
Full article ">Figure 3 Cont.
<p>Effect of sodium selenite (NaSe) on (<b>A</b>) = biomass yield (g/L) and (<b>B</b>) = bioaccumulation of total selenium in biomass (mg/g biomass) in <span class="html-italic">R. mucilaginosa</span> 6S culture. Different letters represent significant differences between NaSe treatments with <span class="html-italic">p</span>-value &lt; 0.05. Error bars represent SD.</p>
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<p>Effect of pH and nitrogen source (peptone; ammonium sulfate and ammonium chloride) on cell growth (<b>A</b>) and total selenium accumulation (<b>B</b>) in <span class="html-italic">R. mucilaginosa</span> 6S yeast. Error bars represent SD Different letters represent significant differences between NaSe treatments with <span class="html-italic">p</span>-value &lt; 0.05.</p>
Full article ">Figure 4 Cont.
<p>Effect of pH and nitrogen source (peptone; ammonium sulfate and ammonium chloride) on cell growth (<b>A</b>) and total selenium accumulation (<b>B</b>) in <span class="html-italic">R. mucilaginosa</span> 6S yeast. Error bars represent SD Different letters represent significant differences between NaSe treatments with <span class="html-italic">p</span>-value &lt; 0.05.</p>
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<p>Growth kinetics of the yeast <span class="html-italic">R. mucilaginosa</span> 6S with two cultivation strategies. (<b>A</b>) Control: yeast cultivation without sodium selenite. (<b>B</b>) Yeast cultured with the incorporation of NaSe at 48 h. (<b>C</b>) Yeast cultured with the addition of sodium selenite at the beginning of the culture, t = 0. Error bars represent SD.</p>
Full article ">Figure 5 Cont.
<p>Growth kinetics of the yeast <span class="html-italic">R. mucilaginosa</span> 6S with two cultivation strategies. (<b>A</b>) Control: yeast cultivation without sodium selenite. (<b>B</b>) Yeast cultured with the incorporation of NaSe at 48 h. (<b>C</b>) Yeast cultured with the addition of sodium selenite at the beginning of the culture, t = 0. Error bars represent SD.</p>
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<p>Principal component analysis (PCA) based on NaSe addition time treatments and the parameters evaluated. The similarity test grouped treatments by Bray–Curtis similarity.</p>
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<p>Changes in protein abundance due to the effect of selenium in <span class="html-italic">Rhodotorula</span> spp. The red dots indicate the proteins that were more abundant in the treatment with Se (133), and the green indicate those that were less abundant due to the treatment (178), or that were more abundant in the control. Vertical dashed lines indicate a fold change ≥ 2. The horizontal line indicates the significance that corresponds to a <span class="html-italic">p</span>-value ≤ 0.05. C: control, Se: samples treated with selenium.</p>
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<p>Heat map showing the abundance of 339 differentially present <span class="html-italic">R. mucilaginosa</span> 6S proteins identified from proteomic analysis in three replicates of control (Ct) and samples treated with NaSe for 48 h (48Se). The color scale illustrates the relative abundance of each protein in the 3 samples; red and green indicate higher and lower abundance compared to the median expression value (black), respectively. The intensity of the color indicates the degree of positive or negative regulation of the proteins.</p>
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11 pages, 632 KiB  
Article
Seasonal Effects on Health Status and Parasitological Traits of an Invasive Minnow in Iberian Waters
by David Almeida, Juan Diego Alcaraz-Hernández, Alejandra Cruz, Esther Lantero, David H. Fletcher and Emili García-Berthou
Animals 2024, 14(10), 1502; https://doi.org/10.3390/ani14101502 - 18 May 2024
Viewed by 518
Abstract
Biological invasions are of special conservation concern in the Iberian Peninsula and other regions with high levels of endemism. Environmental variability, such as the seasonal fluctuations of Mediterranean streams, is a key factor that affects the spread of aquatic species in novel habitats. [...] Read more.
Biological invasions are of special conservation concern in the Iberian Peninsula and other regions with high levels of endemism. Environmental variability, such as the seasonal fluctuations of Mediterranean streams, is a key factor that affects the spread of aquatic species in novel habitats. Fish parasites have a great potential to reflect such changes in the habitat features of freshwater ecosystems. The aim of this study consisted of seasonally analysing the health status and parasitological traits of non-native fish in Iberian waters. In particular, a strongly invasive population of Languedoc minnow Phoxinus septimaniae (leuciscid species native to south-east France) was assessed in Tordera Stream (north-eastern Iberian Peninsula, Mediterranean conditions). Fish were sampled in April, July, and October 2023 by electrofishing. Health status (external/internal organs) was significantly better in autumn (HAI = 28.8) than spring (HAI = 35.6). Life-cycle complexity was higher in spring (LCI = 1.98), whereas parasite abundance and Shannon diversity were significantly lower in autumn (TA = 19.6 and H’ = 2.15, respectively). In October (more ‘benign’ environmental conditions in Iberian streams), minnows could display elevated foraging activity, with fish increasing their health condition and level of parasite resistance/tolerance. Overall results showed a particular seasonal profile of health and parasite infra-communities that allow this minnow species to thrive under highly fluctuating habitat conditions. This information could help environmental managers to control non-native fish in Mediterranean streams. Full article
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<p>Map of the study area showing the geographic location for Tordera Stream (Catalonia Region, NE Spain). Black circles: sampling sites.</p>
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11 pages, 2013 KiB  
Article
Thermal Tolerance of Larval Flannelmouth Sucker Catostomus latipinnis Acclimated to Three Temperatures
by Tawni B. Riepe, Zachary E. Hooley-Underwood and Megan Johnson
Fishes 2024, 9(5), 181; https://doi.org/10.3390/fishes9050181 - 16 May 2024
Viewed by 372
Abstract
As water temperatures rise in streams due to global temperature variations, dams, and increased water usage, native fish species face uncertain futures. Our study defines the thermal limits of flannelmouth sucker larvae. By raising sucker eggs at three acclimation temperatures (11 °C, 16 [...] Read more.
As water temperatures rise in streams due to global temperature variations, dams, and increased water usage, native fish species face uncertain futures. Our study defines the thermal limits of flannelmouth sucker larvae. By raising sucker eggs at three acclimation temperatures (11 °C, 16 °C, and 22 °C), we defined ideal conditions for larval survival and the temperature tolerance range using critical thermal maximum (CTMax) and minimum (CTMin) trials. Larvae survived best at 16 °C. Within our three acclimation temperatures, our data suggest that larvae can survive static temperatures between 6.9 °C and 26.4 °C. Beyond an upper temperature of 34.8 °C and a lower temperature of 6.3 °C, these fish may fail to adapt. While flannelmouth suckers withstand high temperatures, even small temperature decreases prove detrimental. By defining the temperature limits of the flannelmouth sucker, we can make informed management decisions to preserve the populations of this desert fish. Full article
(This article belongs to the Section Environment and Climate Change)
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<p>Schematic diagram of the experimental setup. Fifteen 3 L tanks were placed in each of the three temperature treatment troughs (11 °C—blue; 16 °C—yellow; and 22 °C—red). Each tank was supplied with the designated water temperature, controlled in separate head tanks. Each tank contained 50 fertilized flannelmouth sucker eggs at the beginning of the experiment.</p>
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<p>(<b>a</b>). Kaplan–Meier survival plot of flannelmouth sucker eggs to larvae with three temperature treatments (11 °C—blue; 16 °C—yellow; and 22 °C—red), plotted daily over the 62-day experiment. Shaded areas represent 95% confidence intervals and dashed vertical lines represent when all eggs hatched for each treatment (11 °C—20 days; 16 °C—10 days; 22 °C—5 days). Survival post-hatch refers to the remaining larvae in each treatment. Hatch success (<b>b</b>) and larval survival (<b>c</b>) for the three temperature treatments. Vertical bars represent the standard deviation. Brackets with asterisks represent significant differences between treatments <math display="inline"><semantics> <mrow> <mo>(</mo> <mi>p</mi> <mo>&lt;</mo> <mn>0.05</mn> <mo>)</mo> </mrow> </semantics></math>.</p>
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<p>Loss of equilibrium (LOE) of flannelmouth sucker larvae for (<b>a</b>) critical thermal maximum and (<b>b</b>) critical thermal minimum at three temperature treatments (11 °C, 16 °C, and 22 °C) and two fish densities (white = 1 fish 2 L<sup>−1</sup>; gray = 25 fish 2 L<sup>−1</sup>). Boxplot ranges represent the 25th and 75th percentiles; the band near the middle of the box represents the 50th percentile and the median value; whiskers range from the lowest to highest data ranges with points as outliers. Similar letters within the same figure (<b>a</b>,<b>b</b>) indicate no significance between average LOE temperatures, and different letters signify <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>A partial polygonal temperature profile generated from CTMax and CTMin (black data points) and upper and lower incipient lethal estimates for three acclimation temperatures using the WQCC conversion factor (gray data points) for flannelmouth sucker larvae. Points represent average end temperatures (°C; ±stdev) at each acclimation temperature from low-fish-density (●) and high-fish-density (▲) trials. End temperatures represent either the temperature for lethal estimates (gray data points) or loss of equilibrium temperature for CTM data points (black). The polygon includes three zones representing a partial temperature tolerance zone of 251.7 °C<sup>2</sup> within the range of acclimation temperatures that we studied. Polygon zones include the optimal temperature zone independent of acclimation temperatures (In<sub>t</sub>: intrinsic temperature zone) and upper (Up<sub>t</sub>) and lower (LR<sub>t</sub>) temperature zones gained by acclimation (AccTemp)).</p>
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12 pages, 932 KiB  
Article
Development and Characterization of Fifteen Polymorphic Microsatellite Loci for Rare and Endangered Species within Luciobarbus Heckel, 1843 Genus in the Aral Basin and Their Conservation Application
by Kamila Adyrbekova, Silvia Perea and Ignacio Doadrio
Fishes 2024, 9(5), 169; https://doi.org/10.3390/fishes9050169 - 7 May 2024
Viewed by 493
Abstract
Biodiversity conservation entails not only the preservation of specific taxa but also genetic diversity. Despite the crucial role of molecular data in freshwater fish conservation management, there is a scarcity of information regarding the genetic diversity of Luciobarbus Heckel, 1843 (Actinopterygii, Cyprinidae) populations [...] Read more.
Biodiversity conservation entails not only the preservation of specific taxa but also genetic diversity. Despite the crucial role of molecular data in freshwater fish conservation management, there is a scarcity of information regarding the genetic diversity of Luciobarbus Heckel, 1843 (Actinopterygii, Cyprinidae) populations in the Aral system. Therefore, the primary aim of this study was to provide genetic information on two native species of the Luciobarbus genus found in the Aral system: L. conocephalus (Kessler, 1872) and L. brachycephalus (Kessler, 1872). These species, like many others in the Aral system, confront the imminent threat of extinction due to system alterations. However, genetic studies on these species at the nuclear level are challenging because Luciobarbus is an allotetraploid genus. Consequently, genetic investigations thus far have focused mainly on sequencing mitochondrial genes due to their haploid nature. This study has successfully developed fifteen new polymorphic microsatellite loci, which can prove to be valuable for population genetics, conservation, and other pertinent research on these species. Full article
(This article belongs to the Section Taxonomy, Evolution, and Biogeography)
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<p>Sampling location of barbels; (<b>a</b>): Map of Republic of Kazakhstan; (<b>b</b>): Aral–Syrdarya Basin in Kazakhstan territory; 1–5: <span class="html-italic">L. brachycephalus</span> and <span class="html-italic">L. conocephalus</span>.</p>
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<p>Bayesian cluster analysis based on STRUCTURE (<b>A</b>) and results analysis aligned in CLUMPAK (<b>B</b>). The colors represent the mean proportion of membership (Q) to each of the inferred groups K = 5. 1: Bairykum village (<span class="html-italic">L. brachycephalus</span>); 2: Kyzylorda region (<span class="html-italic">L. brachycephalus; L. conocephalus</span>); 3: Basykara Dam (<span class="html-italic">L. brachycephalus</span>); 4: Rice Check (<span class="html-italic">L. brachycephalus; L. conocephalus</span>); 5: Badam River (<span class="html-italic">L. conocephalus</span>).</p>
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11 pages, 1398 KiB  
Article
Nutritional and Organoleptic Characteristics of Sausage Based on an Autochthonous Ecuatorian Fish, Old Blue (Andinoacara rivulatus)
by Marlene Medina, Rosa M. García-Gimeno, Juan Alejandro Neira-Mosquera, Alexandra Barrera and Guiomar Denisse Posada-Izquierdo
Foods 2024, 13(9), 1399; https://doi.org/10.3390/foods13091399 - 2 May 2024
Viewed by 779
Abstract
The consumption of fisheries and aquaculture products has been increasing in recent decades, and it is necessary to strike a balance between production and sustainability in aquaculture; this is essential homework to support the demand for human food. This study aimed to investigate [...] Read more.
The consumption of fisheries and aquaculture products has been increasing in recent decades, and it is necessary to strike a balance between production and sustainability in aquaculture; this is essential homework to support the demand for human food. This study aimed to investigate the sensory and nutritional characteristics of a sausage made from the fillet of the native fish Old Blue (Andinoacara rivulatus) to stimulate the local economy. A multifactorial A*B*C design was used, with Factor A being rearing systems (wild and farmed), Factor B being types of protein (quinoa meal and soybean meal), and Factor C being lipids of animal (pork fat) and vegetable (sunflower oil) origin. Highly significant differences were observed in all formulas, according to Tukey (p < 0.05). The highest protein percentage was with soybean flour at 11.24%, while quinoa flour had 10.80% of the product. In sensory characteristics, the best attributes were for texture in the mouth with a hedonic scale from 0 to 5, with 4.2 firmness being mostly acceptable, odor at 4.5, the aromatic attribute with the highest and best value, and color was the clearest at 4.3 acceptability. The flavor was 4.3, mostly more pleasant according to the tasters. The yield of farmed fillets was 23.16% compared to wild 13.89%, and the balance of sausage yield was 393 g with a yield of 76.33% of the total weight. Microbiological analysis of the sausage with the native species showed the absence of pathogenic microorganisms. A commercial shelf life of 30 days was also established for the sausage, demonstrating an added value through this processing, allowing its exploitation in areas further away from the fishing sites and, thus, a greater possibility of social development in the area. Full article
(This article belongs to the Section Meat)
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<p>Texture in mouth evaluation of sausages of A. rivulatus. <b>Ff</b>: Fish farm, <b>Fw</b>: Fish wild; <b>Sf</b>: Soya flour, <b>Qf</b>: Quinoa flour; <b>Pf</b>: Pork fat, <b>So</b>: sunflower oil.</p>
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<p>Smell in mouth evaluation of sausages of <span class="html-italic">A. rivulatus</span>. <b>Ff</b>: Fish farm, <b>Fw</b>: Fish wild; <b>Sf</b>: Soya flour, <b>Qf</b>: Quinoa flour; <b>Pf</b>: Pork fat, <b>So</b>: sunflower oil.</p>
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<p>Color in mouth evaluation of sausages of A. rivulatus. <b>Ff</b>: Fish farm, <b>Fw</b>: Fish wild; <b>Sf</b>: Soya flour, <b>Qf</b>: Quinoa flour; <b>Pf</b>: Pork fat, <b>So</b>: sunflower oil.</p>
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<p><span class="html-italic">Taste in mouth evaluation</span> of sausages <span class="html-italic">of A. rivulatus</span>. <b>Ff</b>: Fish farm, <b>Fw</b>: Fish wild; <b>Sf</b>: Soya flour, <b>Qf</b>: Quinoa flour; <b>Pf</b>: Pork fat, <b>So</b>: sunflower oil.</p>
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16 pages, 1749 KiB  
Article
Low Genetic and Parasite Diversity of Invasive Pumpkinseed Lepomis gibbosus (Centrarchidae) Expanding in Türkiye
by Yuriy Kvach, Maria Yu. Tkachenko, Daniela Giannetto, Robert Míč, Veronika Bartáková, Sevan Ağdamar, Gülşah Saç, Müfit Özuluğ, Ali Serhan Tarkan and Markéta Ondračková
Diversity 2024, 16(5), 272; https://doi.org/10.3390/d16050272 - 1 May 2024
Viewed by 664
Abstract
Multiple factors can facilitate invasion success, with the absence of natural enemies, such as predators and parasites, recognised as conferring a significant advantage on invasive over native species. Pumpkinseed Lepomis gibbosus (Centrarchidae) represents one of the most successful freshwater fish invaders in Europe. [...] Read more.
Multiple factors can facilitate invasion success, with the absence of natural enemies, such as predators and parasites, recognised as conferring a significant advantage on invasive over native species. Pumpkinseed Lepomis gibbosus (Centrarchidae) represents one of the most successful freshwater fish invaders in Europe. Previous research has highlighted genetic differences between pumpkinseed populations in Türkiye and those in other European regions, attributed to rapid adaptation to new environmental conditions. This study aimed to investigate whether these highly adapted pumpkinseed populations in Türkiye benefit from a potential release from parasites, as proposed by the enemy-release hypothesis. Genetic characterisation of pumpkinseed populations from both European and Asian parts of Türkiye revealed that they share the same cytochrome c oxidase I haplotype as European populations. Microsatellite analysis indicated low genetic diversity, with STRUCTURE analysis confirming the clustering of all Turkish populations, suggesting a common source. Consistent with the low genetic diversity indicative of a small founding population, we observed a limited number of co-introduced parasite species, including the myxozoan Myxobolus dechtiari, the monogenean Onchocleidus dispar, and the digenean Posthodiplostomum centrarchi. Parasite infection by local parasites acquired in Türkiye was rare. Parasite diversity, species richness, and equitability were low, with only nine parasite taxa identified in all four pumpkinseed populations. The most diverse parasite community was found in Değirmenköy Reservoir, located in the European part of Türkiye, where seven parasite taxa were identified. While our study did not uncover genetically distinct pumpkinseed populations in Türkiye, the fish demonstrated resilience against most local parasite species, potentially providing them with an advantage over native species, aligning with the enemy-release hypothesis. Full article
(This article belongs to the Special Issue Diversity, Taxonomy and Systematics of Fish Parasites)
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<p>Map indicating the populations of pumpkinseed <span class="html-italic">Lepomis gibbosus</span> compared in this study. Populations from Türkiye are marked by black frames. Based on the STRUCTURE analysis, dividing into two (<b>A</b>) and six (<b>B</b>) clusters (marked by different colours) was identified as the best-supported model of population structuring.</p>
Full article ">Figure 1 Cont.
<p>Map indicating the populations of pumpkinseed <span class="html-italic">Lepomis gibbosus</span> compared in this study. Populations from Türkiye are marked by black frames. Based on the STRUCTURE analysis, dividing into two (<b>A</b>) and six (<b>B</b>) clusters (marked by different colours) was identified as the best-supported model of population structuring.</p>
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<p>The representation of infracommunities (ranging from zero to four parasite taxa per fish individual) of the invasive pumpkinseed in different localities in Türkiye.</p>
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<p>Dendrogram on Bray–Curtis similarity between parasite communities of <span class="html-italic">Lepomis gibbosus</span> at four localities in Turkey. DEG—Değirmenköy Reservoir, DAV—Davuldere Reservoir, DIP—Dipsiz-Çine Stream, SAR—Sarıçay River.</p>
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16 pages, 4546 KiB  
Article
A Fish-Based Tool for the Quality Assessment of Portuguese Large Rivers
by António Tovar Faro, Maria Teresa Ferreira and João Manuel Oliveira
Fishes 2024, 9(5), 149; https://doi.org/10.3390/fishes9050149 - 23 Apr 2024
Viewed by 829
Abstract
Multimetric indices play a pivotal role in assessing river ecological quality, aligning with the European Water Framework Directive (EU WFD) requirements. However, indices developed specifically for large rivers are uncommon. Our objective was to develop a fish-based tool specifically tailored to assess the [...] Read more.
Multimetric indices play a pivotal role in assessing river ecological quality, aligning with the European Water Framework Directive (EU WFD) requirements. However, indices developed specifically for large rivers are uncommon. Our objective was to develop a fish-based tool specifically tailored to assess the ecological quality in Portuguese large rivers. Data were collected from seven sites in each of three Portuguese large rivers (Minho, Guadiana, and Tagus). Each site was classified using an environmental disturbance score, combining different pressure types, such as water chemistry, land use, and hydromorphological alterations. The Fish-based Multimetric Index for Portuguese Large Rivers (F-MMIP-LR) comprises four metrics: % native lithophilic individuals; % alien individuals; % migrant individuals; and % freshwater native individuals, representing compositional, reproductive, and migratory guilds. The index showed good performance in separating least- and most-disturbed sites. Least-disturbed sites were rated ‘high’ or ‘good’ by F-MMIP-LR, contrasting with no such classification for most-disturbed sites, highlighting index robustness. The three rivers presented a wide range of F-MMIP-LR values across the gradient of ‘bad’ to ‘high’, indicating that, on a large spatial extent, the biological condition was substantially altered. The F-MMIP-LR provides vital information for managers and decision-makers, guiding restoration efforts and strengthening conservation initiatives in line with the WFD. Full article
(This article belongs to the Special Issue Biomonitoring and Conservation of Freshwater & Marine Fishes)
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<p>Study area and location of the sampled sites.</p>
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<p>Distribution of metric values from the final range test for the least disturbed (LD) and most disturbed (MD) sites, and results from the Kruskal–Wallis test (<span class="html-italic">n</span> = 21).</p>
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<p>Distribution of F-MMIP-LR scores across least disturbed (LD) and most disturbed (MD) sites, and results from the Kruskal–Wallis test (<span class="html-italic">n</span> = 21).</p>
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<p>Relationship between the F-MMIP-LR scores and the environmental disturbance scores (<span class="html-italic">r<sub>s</sub></span> = −0.639; <span class="html-italic">n</span> = 21).</p>
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<p>F-MMIP-LR quality classes (High; Good; Moderate; Poor; Bad) across sampled sites.</p>
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13 pages, 5489 KiB  
Article
Assessing Prospects of Integrating Asian Carp Polyculture in Europe: A Nature-Based Solution under Climate Change?
by Oksana Nekrasova, Mihails Pupins, Volodymyr Tytar, Leonid Fedorenko, Oleksandr Potrokhov, Arturs Škute, Andris Čeirāns, Kathrin Theissinger and Jean-Yves Georges
Fishes 2024, 9(4), 148; https://doi.org/10.3390/fishes9040148 - 22 Apr 2024
Viewed by 763
Abstract
Aquaculture’s role in addressing food security has grown, with a spotlight on Asian carp species. Polyculture, i.e. cultivating multiple fish species in a single system, is being increasingly adopted for its resource efficiency and economic benefits. This practice for Asian fish for food [...] Read more.
Aquaculture’s role in addressing food security has grown, with a spotlight on Asian carp species. Polyculture, i.e. cultivating multiple fish species in a single system, is being increasingly adopted for its resource efficiency and economic benefits. This practice for Asian fish for food and ornamental purposes is gaining traction in Europe despite their invasive potential. Rising temperatures due to climate change offer an opportunity for thermophilic Asian carps (Hypophthalmichthys molitrix and Aristichthys nobilis). Using GIS modeling (Maxent), we identified the possible settlement of Asian carp in Northern Europe amidst climate change. We analyzed carp global distribution centers, assessed the potential carp spread in Europe, and evaluated their potential suitability for polyculture systems. By 2050, H. molitrix may extend its range to 58–62° N latitude, with a potential 1.7-fold habitat increase, while A. nobilis, which are more heat-tolerant, may move north to 52–58° N latitude, with a 1.3-fold potential increase. Despite the slight ecological differences in their native habitats, niche modeling indicates that these carp can occupy similar niches in Europe (proven statistically). The eventuality of using Asian species for polyculture in Europe presents both opportunities and challenges in the face of a changing climate as long as invasion risks are prevented. Envisaging such polyculture, yet very carefully for the protection of ecosystems, can help food security. Full article
(This article belongs to the Special Issue Biodiversity and Spatial Distribution of Fishes)
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<p>Results of the analysis of SDM binomial tests (green color &gt; 0.5, CliMond dataset [<a href="#B35-fishes-09-00148" class="html-bibr">35</a>]). <span class="html-italic">H. molitrix:</span> (<b>A</b>) current; (<b>B</b>) 2050 (2041–2060). <span class="html-italic">A. nobilis</span>: (<b>C</b>) current; (<b>D</b>) 2050 (2041–2060).</p>
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<p>Response curves generated by Maxent of Asian carps for the variable “annual mean temperature” (°C, bio1): <span class="html-italic">H. molitrix</span> (<b>A</b>); <span class="html-italic">A. nobilis</span> (<b>B</b>) (<a href="#fishes-09-00148-t001" class="html-table">Table 1</a>).</p>
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<p>Potential (probabilistic) model of Asian carp expansion built in the Maxent program in Europe based on CliMond dataset (red color &gt; 0.5). <span class="html-italic">H. molitrix</span>: (<b>A</b>) current (dotted line marks—55° N, red line marks—53° N); (<b>B</b>) CliMond dataset 2050 (thin line—62° N, thick red line—58° N). <span class="html-italic">A. nobilis</span> (dotted line—55° N; thin line—51° N, thick red line—48° N): (<b>C</b>) current; (<b>D</b>) CliMond dataset 2050 (<a href="#app1-fishes-09-00148" class="html-app">Table S1</a>).</p>
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<p>Niche clustering (geographic space, current CliMond) for (<b>A</b>) <span class="html-italic">H. molitrix</span>, 55°N; (<b>B</b>) <span class="html-italic">A. nobilis,</span> 53° N. Differently colored marks represent different biotopes where the fish species were registered according to the data collected and which have the combination of different climatic factors. Red triangle (1)—close-to-home region; green circle (2)—westernmost finds; and orange circles (3)—intermediate conditions.</p>
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<p>Triplot showing the bioclimatic spaces of the three groups of occurrence records (niche clustering, <a href="#fishes-09-00148-f004" class="html-fig">Figure 4</a>) of Asian carps (<span class="html-italic">H. molitrix</span> (<b>A</b>); <span class="html-italic">A. nobilis</span> (<b>B</b>)), representing the suitability for breeding, including native (red triangle) and invaded (green and orange circles) ranges (marked in <a href="#fishes-09-00148-f004" class="html-fig">Figure 4</a>).</p>
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<p>Potential (probabilistic) model of Asian carps (<span class="html-italic">H. molitrix</span> (<b>A</b>); <span class="html-italic">A. nobilis</span> (<b>B</b>)) in Northern Europe using the example of Latvia. The expansion was built in the Maxent program based on a dataset of 13 environmental variables (red color &gt; 0.5; EarthEnv NGEI, <a href="#app1-fishes-09-00148" class="html-app">Table S2</a>).</p>
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10 pages, 1097 KiB  
Article
Effect of Calanus finmarchicus Hydrolysate Inclusion on Diet Attractiveness for Whiteleg Shrimp (Litopenaeus vannamei)
by Isak Bøgwald, Simon Herrig, Alice Marie Pedersen, Sileshi Gizachew Wubshet and Karl-Erik Eilertsen
Fishes 2024, 9(4), 134; https://doi.org/10.3390/fishes9040134 - 13 Apr 2024
Viewed by 898
Abstract
Shrimp feed formulations have moved towards less fish meal and more of the readily available and cheaper plant proteins. To counteract the lower attractiveness and palatability of plant proteins, feeds are supplemented with ingredients known to have chemoattractive properties that will increase feed [...] Read more.
Shrimp feed formulations have moved towards less fish meal and more of the readily available and cheaper plant proteins. To counteract the lower attractiveness and palatability of plant proteins, feeds are supplemented with ingredients known to have chemoattractive properties that will increase feed intake. This study investigated the putative chemoattractive effect of Calanus finmarchicus hydrolysate, when used as a dietary supplement in shrimp feeds. C. finmarchicus is a zooplankton species native to the northern Atlantic Ocean and is a novel and sustainable raw material for shrimp feed products. Diet attractiveness was evaluated in a 24-day feeding trial with whiteleg shrimp (Litopenaeus vannamei) by measuring the intake of 12 diets with various levels of fish meal, calanus hydrolysate, and krill (Euphausia superba) meal. Higher inclusion rates of both ingredients resulted in increased feed intake, and supplementing the high fish meal diet with calanus hydrolysate gave a statistically significant higher feed intake. Low molecular weight peptides, chemoattractive amino acids, and the water-soluble nature of the hydrolysate could explain the chemoattractive properties observed in the study. Full article
(This article belongs to the Section Nutrition and Feeding)
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<p>Study design overview of the attractiveness feeding trial with whiteleg shrimp (<span class="html-italic">Litopenaeus vannamei</span>), quantifying daily feed intake of 12 experimental diets (36 tanks, <span class="html-italic">n</span> = 3). (<b>A</b>) Diets with low and high fish meal were produced with different inclusion levels of an attractive ingredient (<span class="html-italic">Calanus finmarchicus</span> hydrolysate or krill meal). (<b>B</b>) Submerged feeding trays were given three times a day. Daily rotation of the 12 diets were performed to exclude tank bias, and every tank received each diet twice. (<b>C</b>) Uneaten feed was collected after each feeding time, and feed intake comparisons were made on the difference between distributed and uneaten feed for every diet. Figure created with BioRender.com.</p>
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<p>Feed intake of experimental diets with varying inclusion levels of an attractive ingredient (Calanus hydrolysate, CH or krill meal, KM), in percentage relative to control diets. (<b>A</b>) Diets formulated with low fish meal (FM, 10%) and an attractive ingredient. (<b>B</b>) Diets formulated with high FM (20%) and an attractive ingredient. CH2: Calanus hydrolysate 2% inclusion. CH4: Calanus hydrolysate 4% inclusion. CH6: Calanus hydrolysate 6% inclusion. CTRL: Control. FM: Fish meal. KM2: Krill meal 2% inclusion. KM3: Krill meal 3% inclusion. Bars are means ± standard deviation (<span class="html-italic">n</span> = 3). Lower-case letters (a, b, c) denote statistically significant differences between the diets (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Feed intake response for attractive ingredient diets relative to negative control, using simple linear regression with dietary inclusion rate (%) as the single explanatory variable. Based on combined data from low and high fish meal groups (<span class="html-italic">n</span> = 3 for every diet in both groups). (<b>A</b>) Response based on inclusion rates (%) of the ingredients. (<b>B</b>) Response based on inclusion rates (%) of the dry matter content of the ingredients. CH: Calanus hydrolysate. CTRL: Control. KM: Krill meal.</p>
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20 pages, 3726 KiB  
Article
The Influence of Gamma Radiation on Different Gelatin Nanofibers and Gelatins
by Carmen Gaidau, Maria Râpă, Gabriela Ionita, Ioana Rodica Stanculescu, Traian Zaharescu, Rodica-Roxana Constantinescu, Andrada Lazea-Stoyanova and Maria Stanca
Gels 2024, 10(4), 226; https://doi.org/10.3390/gels10040226 - 26 Mar 2024
Viewed by 829
Abstract
Gelatin nanofibers are known as wound-healing biomaterials due to their high biocompatible, biodegradable, and non-antigenic properties compared to synthetic-polymer-fabricated nanofibers. The influence of gamma radiation doses on the structure of gelatin nanofiber dressings compared to gelatin of their origin is little known, although [...] Read more.
Gelatin nanofibers are known as wound-healing biomaterials due to their high biocompatible, biodegradable, and non-antigenic properties compared to synthetic-polymer-fabricated nanofibers. The influence of gamma radiation doses on the structure of gelatin nanofiber dressings compared to gelatin of their origin is little known, although it is very important for the production of stable bioactive products. Different-origin gelatins were extracted from bovine and donkey hides, rabbit skins, and fish scales and used for fabrication of nanofibers through electrospinning of gelatin solutions in acetic acid. Nanofibers with sizes ranging from 73.50 nm to 230.46 nm were successfully prepared, thus showing the potential of different-origin gelatin by-products valorization as a lower-cost alternative to native collagen. The gelatin nanofibers together with their origin gelatins were treated with 10, 20, and 25 kGy gamma radiation doses and investigated for their structural stability through chemiluminescence and FTIR spectroscopy. Chemiluminescence analysis showed a stable behavior of gelatin nanofibers and gelatins up to 200 °C and increased chemiluminescent emission intensities for nanofibers treated with gamma radiation, at temperatures above 200 °C, compared to irradiated gelatins and non-irradiated nanofibers and gelatins. The electron paramagnetic (EPR) signals of DMPO adduct allowed for the identification of long-life HO radicals only for bovine and donkey gelatin nanofibers treated with a 20 kGy gamma radiation dose. Microbial contamination with aerobic microorganisms, yeasts, filamentous fungi, Staphylococcus aureus, Escherichia coli, and Candida albicans of gelatin nanofibers treated with 10 kGy gamma radiation was under the limits required for pharmaceutical and topic formulations. Minor shifts of FTIR bands were observed at irradiation, indicating the preservation of secondary structure and stable properties of different-origin gelatin nanofibers. Full article
(This article belongs to the Special Issue Gel-Based Novel Wound Dressing)
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<p>Gelatins extracted from: (<b>a</b>,<b>a’</b>) bovine hide; (<b>b</b>,<b>b’</b>) donkey hide; (<b>c</b>,<b>c’</b>) rabbit skin; (<b>d</b>,<b>d’</b>) fish scales.</p>
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<p>SEM images of gelatin nanofibers from gelatins of different origins: (<b>a</b>) bovine gelatin nanofibers; (<b>b</b>) donkey gelatin nanofibers; (<b>c</b>) rabbit gelatin nanofibers; (<b>d</b>) fish scale gelatin nanofibers.</p>
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<p>SEM images of gelatin nanofibers from gelatins of different origins: (<b>a</b>) bovine gelatin nanofibers; (<b>b</b>) donkey gelatin nanofibers; (<b>c</b>) rabbit gelatin nanofibers; (<b>d</b>) fish scale gelatin nanofibers.</p>
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<p>Chemiluminescent behavior of gelatin nanofibers (<b>a</b>,<b>c</b>,<b>e</b>,<b>g</b>) and gelatins (<b>b</b>,<b>d</b>,<b>f</b>,<b>h</b>) depending on temperature.</p>
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<p>Chemiluminescent behavior of gelatin nanofibers (<b>a</b>,<b>c</b>,<b>e</b>,<b>g</b>) and gelatins (<b>b</b>,<b>d</b>,<b>f</b>,<b>h</b>) depending on temperature.</p>
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<p>The EPR spectra of DMPO adducts in (<b>a</b>) bovine hide gelatin nanofibers, (<b>b</b>) rabbit skin gelatin nanofibers, (<b>c</b>) donkey hide gelatin nanofibers, and (<b>d</b>) fish scale gelatin nanofibers after exposure to a 20 kGy irradiation dose.</p>
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<p>EPR spectra for DMPO adducts in (<b>a</b>,<b>b</b>) bovine, (<b>c</b>) rabbit, (<b>d</b>,<b>f</b>) donkey, and (<b>e</b>) fish scale gelatin nanofibers after 30 min. Initial signals (<b>a</b>,<b>d</b>) and signals after 30 min (<b>b</b>,<b>c</b>,<b>e</b>,<b>f</b>).</p>
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<p>FTIR spectra of bovine (<b>a</b>), donkey (<b>b</b>), rabbit (<b>c</b>), and fish (<b>d</b>) gelatin nanofibers and bovine (<b>e</b>), donkey (<b>f</b>), rabbit (<b>g</b>), and fish (<b>h</b>) gelatins before (blue line) and after gamma irradiation at 10 kGy (red line), 20 kGy (green line), and 25 kGy (magenta line).</p>
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<p>FTIR spectra of bovine (<b>a</b>), donkey (<b>b</b>), rabbit (<b>c</b>), and fish (<b>d</b>) gelatin nanofibers and bovine (<b>e</b>), donkey (<b>f</b>), rabbit (<b>g</b>), and fish (<b>h</b>) gelatins before (blue line) and after gamma irradiation at 10 kGy (red line), 20 kGy (green line), and 25 kGy (magenta line).</p>
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<p>The ratio of ordered secondary structures of gelatin nanofibers of different origins and at different gamma radiation doses, determined by the deconvolution of the amide III band.</p>
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17 pages, 17951 KiB  
Article
Dialdehyde Starch as a Cross-Linking Agent Modifying Fish Collagen Film Properties
by Patrycja Brudzyńska, Karolina Kulka-Kamińska, Łukasz Piwowarski, Katarzyna Lewandowska and Alina Sionkowska
Materials 2024, 17(7), 1475; https://doi.org/10.3390/ma17071475 - 23 Mar 2024
Viewed by 919
Abstract
The aim of this research was the modification of fish collagen films with various amounts of dialdehyde starch (DAS). Film properties were examined before and after the cross-linking process by DAS. Prepared biopolymer materials were characterized by Fourier Transform Infrared Spectroscopy and Atomic [...] Read more.
The aim of this research was the modification of fish collagen films with various amounts of dialdehyde starch (DAS). Film properties were examined before and after the cross-linking process by DAS. Prepared biopolymer materials were characterized by Fourier Transform Infrared Spectroscopy and Atomic Force Microscopy. Moreover, the mechanical, thermal and swelling properties of the films were evaluated and the contact angle was measured. Research has shown that dialdehyde starch applied as a cross-linking agent influences collagen film properties. Mechanical testing indicated a decrease in Young’s Modulus and an increase in breaking force, elongation at break, and tensile strength parameters. Results for contact angle were significantly higher for collagen films cross-linked with DAS; thus, the hydrophilicity of samples decreased. Modified samples presented a lower swelling degree in PBS than native collagen films. However, the highest values for the degree of swelling among the modified specimens were obtained from the 1% DAS samples, which were 717% and 702% for 1% and 2% collagen, respectively. Based on AFM images and roughness values, it was noticed that DAS influenced collagen film surface morphology. The lowest value of Rq was observed for 2%Coll_2%DAS and was approximately 10 nm. Analyzing thermograms for collagen samples, it was observed that pure collagen samples were less thermally stable than cross-linked ones. Dialdehyde starch is a promising cross-linking agent for collagen extracted from fish skin and may increase its applicability. Full article
(This article belongs to the Special Issue Feature Paper in the Section 'Polymeric Materials' (2nd Edition))
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<p>FTIR spectra for collagen films obtained from 1% solution with DAS addition (experiment conditions: resolution = 4 cm<sup>−1</sup>; wavenumber range = 400–4000 cm<sup>−1</sup>; 64 scans).</p>
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<p>FTIR spectra for collagen films obtained from 2% solution with DAS addition (experiment conditions: resolution = 4 cm<sup>−1</sup>; wavenumber range = 400–4000 cm<sup>−1</sup>; 64 scans).</p>
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<p>Young Modulus for collagen films with DAS addition (experiment conditions: the speed starting position equaled 50 mm/min, the speed of the initial force 5 mm/min, and the initial force 0.1 MPa).</p>
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<p>Tensile strength for collagen films with DAS addition (experiment conditions: the speed starting position equaled 50 mm/min, the speed of the initial force 5 mm/min, and the initial force 0.1 MPa).</p>
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<p>Breaking force for collagen films with DAS addition (experiment conditions: the speed starting position equaled 50 mm/min, the speed of the initial force 5 mm/min, and the initial force 0.1 MPa).</p>
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<p>Elongation at break for collagen films with DAS addition (experiment conditions: the speed starting position equaled 50 mm/min, the speed of the initial force 5 mm/min, and the initial force 0.1 MPa).</p>
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<p>Swelling degree for collagen films (1%) with DAS addition (experiment conditions: swelling in PBS at 37 °C).</p>
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<p>Swelling degree for collagen films (2%) with DAS addition (experiment conditions: swelling in PBS at 37 °C).</p>
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<p>TG and DTG curves obtained for unmodified and modified collagen films (obtained from 1% solution) (temperature range from 20 to 600 °C at a heating rate of 20 °C/min in nitrogen atmosphere).</p>
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<p>TG and DTG curves obtained for unmodified and modified collagen films (obtained from 1% solution) (temperature range from 20 to 600 °C at a heating rate of 20 °C/min in nitrogen atmosphere).</p>
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<p>TG and DTG curves obtained for unmodified and modified collagen films (obtained from 2% solution) (temperature range from 20 to 600 °C at a heating rate of 20 °C/min in nitrogen atmosphere).</p>
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12 pages, 3624 KiB  
Article
Influence of Organic Matter from Native Fish on the Antimicrobial Efficacy of Sodium Hypochlorite (NaClO) in Reducing Salmonella spp. Population
by Jaqueline Oliveira Reis, Carine Baggio Cavalcante, Nathaly Barros Nunes, Adelino Cunha Neto, Maxsueli Aparecida Moura Machado, Yuri Duarte Porto, Vinicius Silva Castro and Eduardo Eustáquio de Souza Figueiredo
Microbiol. Res. 2024, 15(1), 342-353; https://doi.org/10.3390/microbiolres15010023 - 29 Feb 2024
Viewed by 861
Abstract
Salmonella spp. is not part of the fish microbiota, being introduced through contaminated water or improper handling. In slaughterhouses, five parts per million (ppm) of free chlorine is recommended in the washing step to eliminate this pathogen. However, Salmonella spp. is still detected [...] Read more.
Salmonella spp. is not part of the fish microbiota, being introduced through contaminated water or improper handling. In slaughterhouses, five parts per million (ppm) of free chlorine is recommended in the washing step to eliminate this pathogen. However, Salmonella spp. is still detected in fish processing plants due to persistent contamination as a result of chlorine–organic matter interactions that reduce chlorine effectiveness. Therefore, this study aimed to test whether organic matter contained in culture media and fish washes interferes with the efficacy of chlorine at 2 and 5 ppm, and what is the time of action required to inactivate ATCC and wild strains of S. typhimurium. For this, the elimination or survival of these strains was investigated when exposed to chlorinated solution for different durations (0, 5, 30, 60, 90 and 120 min) in culture medium, 0.85% saline solution and fish wash (in natura and sterilized). The results showed that the use of 5 ppm of free chlorine is efficient, even when the chlorine remains in contact with the organic matter (washed from the fish), as it reduced the bacterial population by ~5 log log10 CFU/mL of Salmonella spp., showing that this reduction was due to interactions, as long as the chlorine action time was 30 min. Full article
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<p>Exposure of <span class="html-italic">S. typhimurium</span> strains (ATCC and wild P06) to 2 and 5 ppm of free chlorine at 0, 5, 30, 60, 90 and 120 min in different treatments: (<b>A</b>) exposure of strains in culture medium (BHI); (<b>B</b>) exposure of resuspended strains in saline.</p>
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<p>Inactivation (Log<sub>10</sub> CFU/mL) of <span class="html-italic">Salmonella typhimurium</span> strains (ATCC 10749 and the P06 wild strain) when exposed to 2 ppm (<b>A</b>) and 5 ppm (<b>B</b>) of free chlorine in the time periods (T0 to T120 min) when included in culture medium. Student’s <span class="html-italic">t</span> test; * indicates case comparison differences between treatments; ns indicates that there was no difference in time periods (T0 to T120).</p>
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<p>Inactivation (Log<sub>10</sub> CFU/mL) of <span class="html-italic">Salmonella typhimurium</span> (ATCC 10749 and wild P06) when exposed to 2 ppm (<b>A</b>) and 5 ppm (<b>B</b>) of free chlorine in the time periods (T0 to T120 min) when included in culture medium or saline solution. Student’s <span class="html-italic">t</span> test; * indicates case comparison differences between treatments; ns indicates that there was no difference in time periods (T0 to T120 min).</p>
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<p>Inactivation (Log<sub>10</sub> CFU/mL) of <span class="html-italic">Salmonella typhimurium</span> (ATCC 10749 and wild P06) when exposed to 5 ppm of free chlorine from the inoculum in saline solution with the addition of 5% sterilized fish wash (<b>A</b>) and non-sterilized fish wash (<b>B</b>). * Indicates case comparison differences between treatments; ns indicates that there was no difference in time periods (T0 to T120 min).</p>
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<p>Decline of chlorine action at 5 ppm in contact with different percentages of fish washing.</p>
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<p>Comparison of the inactivation of the <span class="html-italic">Salmonella typhimurium</span> P06 strain due to the treatments (T3 = culture medium; T4 = saline solution; T5 = autoclaved washing; T6 = washing without autoclaving) in relation to the exposure time that varied from T0 to T120 min. Equal uppercase and lowercase letters indicate treatments that did not differ from each other.</p>
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17 pages, 17790 KiB  
Article
Ponds and Wetlands Landscapes of Flood Management in the Cities of the Lower Yellow River Floodplain—The Case of Huaiyang, China
by Lei Zhang and G. Mathias Kondolf
Water 2024, 16(5), 703; https://doi.org/10.3390/w16050703 - 28 Feb 2024
Viewed by 781
Abstract
As interest has increased in green infrastructure and nature-based solutions, traditional approaches to managing landscapes have emerged as providing useful models for sustainable water and land management. From local gazetteers, archives, oral histories, maps, and satellite images, we documented the historical landscapes of [...] Read more.
As interest has increased in green infrastructure and nature-based solutions, traditional approaches to managing landscapes have emerged as providing useful models for sustainable water and land management. From local gazetteers, archives, oral histories, maps, and satellite images, we documented the historical landscapes of ponds and wetlands back to the 17th century in the historic city of Huaiyang on the lower Yellow River floodplain. Like neighboring cities, Huaiyang was protected by a ring levee. As the floodplain rapidly aggraded, cities within the levee became topographically lower than the surrounding landscape. In this context, ponds and wetlands were essential for flood and storm water retention in the low-lying city. These seasonal waterbodies alternated between drying and wetting, providing a dynamic and diverse background for native habitats and human uses. CORONA satellite images ca. 1960s show ponds and wetlands shrinking in the dry season to 35.6% of their wet season extent, while the farmed area expanded 5.3 times. The multiple uses of wetlands included dry-season farming, harvesting wetland plants, and fishing, each use adapted to the localized topographic and hydrologic conditions of the wetlands. The late 20th century saw massive transformations for modern agriculture and urbanization. Understanding the historical evolution of this landscape can provide inspiration for developing green infrastructure and resilient designs that preserve cultural diversity and sustainably manage water in an urbanizing landscape. Full article
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<p>Diagrammatic plot of cities of the lower Yellow River floodplain (based on survey maps of the 1950s–1970s).</p>
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<p>Section diagram of the floodplain cities showing the formation process of flood adaptive landscapes.</p>
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<p>Schematic diagram of the flood adaptive development history of Huaiyang.</p>
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<p>The orthorectified CORONA images, and the record of annual precipitation totals in Huaiyang, 1954–1975 [<a href="#B25-water-16-00703" class="html-bibr">25</a>] (p. 163).</p>
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<p>Landscape classification and calculation based on CORONA images.</p>
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<p>Five of Huaiyang Eight Scenes related to ponds and wetlands, 1754 [<a href="#B21-water-16-00703" class="html-bibr">21</a>] (Photograph courtesy of the National Library of China).</p>
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<p>The urban expansion of Huaiyang city from the 1960s to the 2010s (based on survey map of 1962, CORONA image of 1971-09-20, Huaiyang urban plan of 2006, and the Google Earth map of 1987, 1999, and 2017), and population data of 1964 [<a href="#B39-water-16-00703" class="html-bibr">39</a>], 1982 [<a href="#B38-water-16-00703" class="html-bibr">38</a>], 1991 [<a href="#B25-water-16-00703" class="html-bibr">25</a>], 2005 [<a href="#B40-water-16-00703" class="html-bibr">40</a>], 2020 [<a href="#B41-water-16-00703" class="html-bibr">41</a>].</p>
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<p>Landscape transformation of recent decades shown on the satellite images of Huaiyang of 1991 [<a href="#B25-water-16-00703" class="html-bibr">25</a>] and 2015 (Google Earth map).</p>
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15 pages, 1631 KiB  
Article
Karyotype Variability in Wild Narcissus poeticus L. Populations from Different Environmental Conditions in the Dinaric Alps
by Fatima Pustahija, Neđad Bašić and Sonja Siljak-Yakovlev
Plants 2024, 13(2), 208; https://doi.org/10.3390/plants13020208 - 11 Jan 2024
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Abstract
Narcissus poeticus L. (Amaryllidaceae), a facultative serpentinophyte, is a highly variable species and particularly important ancestor of cultivated daffodils, but is rarely studied in field populations. This study, based on natural populations in the Balkans, focused on karyotype variability, genome size, ploidy and [...] Read more.
Narcissus poeticus L. (Amaryllidaceae), a facultative serpentinophyte, is a highly variable species and particularly important ancestor of cultivated daffodils, but is rarely studied in field populations. This study, based on natural populations in the Balkans, focused on karyotype variability, genome size, ploidy and the presence of B chromosomes. Thirteen native populations from different environmental and soil conditions were collected and analyzed using flow cytometry to estimate nuclear genome size, fluorescence in situ hybridization (FISH) for physical mapping of rDNA, fluorochrome labeling (chromomycin and Hoechst) for heterochromatin organization and silver nitrate staining of nucleoli for determining rRNA gene activity. The organization of rDNA and natural triploids is reported here for the first time. The presence of individuals with B chromosomes (in 9/13 populations) and chromosomal rearrangements was also detected. The observed B chromosome showed three different morphotypes. The most frequent submetacentric type showed four different patterns, mainly with active ribosomal genes. The results obtained show that N. poeticus has a dynamic genome with variable genome size due to the presence of polyploidy, B chromosomes and chromosomal rearrangements. It is hypothesized that the observed changes reflect the response of the genome to different environmental conditions, where individuals with B chromosomes appear to have certain adaptive advantages. Full article
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Figure 1

Figure 1
<p>Results of chromomycin banding and FISH of the standard karyotype for different populations of <span class="html-italic">N. poeticus</span>. (<b>A1</b>) CMA and (<b>A2</b>) FISH for diploid individuals with standard karyotype without Bs. Chromosome pair 7 shows very intense CMA and 35S rDNA signals only at the secondary constriction on the short arm, with no staining on the satellite (red arrows). The blue arrows indicate the Hoechst staining colocating with the CMA band. (<b>B1</b>) CMA and (<b>B2</b>) FISH for diploid individuals with standard karyotype and 1 B chromosome (white arrows; populations 5–10). Chromosome pair 7 showed very intense CMA and 35S rDNA signals on both sides of the secondary constriction (red arrows). (<b>C1</b>) CMA and (<b>C2</b>) FISH for diploid individuals with 2 Bs (white arrows; population 11). (<b>D1</b>) CMA and (<b>D2</b>) FISH for triploid individuals with 3 different types of Bs (white arrows, serpentine population 8). (<b>E</b>) Idiogram corresponding to the standard diploid karyotype (two homologous chromosomes of pair 7 show the difference in satellite staining methods (boxed)). Scale bar on photographs = 5 µm.</p>
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<p>Bs polymorphism. (<b>A</b>) CMA and FISH images of different types of Bs chromosomes. (<b>B</b>) Idiograms corresponding to different types of B chromosomes: (Ia) submetacentric Bs with no signals, (Ib–Id) submetacentric Bs with different signal pattern (colocalization of CMA and 35S rDNA in block Ib, dispersed Ic, or with both patterns Id); (II) metacentric Bs with two signals on both arms, one in block and the other dispersed; and type (III) subtelocentric Bs with a dispersed signal on the long arm near the centromere.</p>
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