DbVar and DGVa: public archives for genomic structural variation
I Lappalainen, J Lopez, L Skipper… - Nucleic acids …, 2012 - academic.oup.com
I Lappalainen, J Lopez, L Skipper, T Hefferon, JD Spalding, J Garner, C Chen, M Maguire…
Nucleic acids research, 2012•academic.oup.comMuch has changed in the last two years at DGVa (http://www. ebi. ac. uk/dgva) and dbVar
(http://www. ncbi. nlm. nih. gov/dbvar). We are now processing direct submissions rather
than only curating data from the literature and our joint study catalog includes data from over
100 studies in 11 organisms. Studies from human dominate with data from control and case
populations, tumor samples as well as three large curated studies derived from multiple
sources. During the processing of these data, we have made improvements to our data …
(http://www. ncbi. nlm. nih. gov/dbvar). We are now processing direct submissions rather
than only curating data from the literature and our joint study catalog includes data from over
100 studies in 11 organisms. Studies from human dominate with data from control and case
populations, tumor samples as well as three large curated studies derived from multiple
sources. During the processing of these data, we have made improvements to our data …
Abstract
Much has changed in the last two years at DGVa (http://www.ebi.ac.uk/dgva) and dbVar (http://www.ncbi.nlm.nih.gov/dbvar). We are now processing direct submissions rather than only curating data from the literature and our joint study catalog includes data from over 100 studies in 11 organisms. Studies from human dominate with data from control and case populations, tumor samples as well as three large curated studies derived from multiple sources. During the processing of these data, we have made improvements to our data model, submission process and data representation. Additionally, we have made significant improvements in providing access to these data via web and FTP interfaces.